Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909143.1_cds_XP_016459370.1_52904
CDS Infomation

[gene=LOC107782934] [db_xref=GeneID:107782934] [protein=uncharacterized protein LOC107782934] [protein_id=XP_016459370.1] [location=join(93878..94486,94598..94630,95283..96058,96282..96573,96658..96879,97042..97215,97520..97708,97801..97914,98069..98380)] [gbkey=CDS]
Sequence

ATGGGTCTTGGGAAGAAGAAGAAAAAGGGTGCTTCTTTCCAAATTGATTACATTGTACAT
ATCCAATTGATTAGGCCATGGCCCCCATCAGAATCATTGAGGTCTGTTCAGTCAGTATTA
CTTCAGTGGGAAAATGGCGATCGCAATTCTGGATTTGTGACTTCCTCTGTTGAGGATGAC
TATCTTGAAATTAACAAGACTTTCACTCTATTCTTAACTTTATGTCGCGAGAAAAAATCC
AAAGATAAATTTCTAAAGAATAACTTGGAGTTCTCCTTGTATGAATATACAAAGGAGAAT
GCAGCTCAAGGTCAACTATTGGGGACAGCTTCAATAAATTTTGCAGAATATGGAGTTATC
AAAGAAACTTTAGCTATTAGTGTTCCTTTAAACTGCAAGAAGAGTTCTAAAAGCTTGCTG
CAACCATCTCTATATGTTAAGGTTCAGCCAGCAAAAGATAAACAAGAATCAGACTTAATG
ATTGATGATGCTGAAGATGATTCTGATGCTGCTTCTTATACTGATGATGATGTTTCGTCG
CACTCATCCTCAACTTTTGCCTCTTCTCTTTTTGAAGCTGCTTGGGCTTCACCATCTAAC
AATGTAAAGGTGGCATGGCCCTCGCCATCTCGAGTTGTAAAGAATGACATGCATGAAGAA
GCAGCCAGCGGAACAAGCAAAAGTGAAGAAAATACTCAGATATCTAAAGAAAAATACATT
GATAGATTGATATCAAAAATTACGACTTCACATATGCATACTCAGGCAGGTGTCGACAGT
CAAAATAGTTCGGATGAAACAACAGAACATGATTTTGGACAGGACGAACTGTTCCTTGAT
GACACAAGAGACTTGTCAGACAACAAAATAGCTAAAAGTATGAAAAGACAAGGTACAATG
AGTTCCATTCGTAAAGCTCTTGGAGCTCAGATCACACATGGCCGATTGAAGCCAGTGAAG
TCTGTTCAGATAAGAGACTCTGCAAGTGCAAATGTATTTTTGGGGAACACTGAGATTATT
AAGAAAGAAATAAAAGAACACACACCTATAGAAACTAGTAGTATTGCTAAAAGTACAGGA
GTGGAGAAAAAAGAACCAAAGAATACTACCAGTACCTCAGCAACTGAAAAAAGAGATCCT
GCAAATGTTATGTCAAAGAGTAAACCTGAATCGGAATCTAGAATTCAGATGCTTGAGGAA
GAACTAAAAGAAGCTGCAGCTATTGAAGTTGGCTTTTATTCTGTAGTTGCTGAGCATGGA
AGTTCAATGAACAAAGTTCACACTCCAGCCAGGCGCCTTGCTAGATTTTATCTCCACGCT
TGGAGAACAAAATCCACTGCTAAACAGGCAAGTGCTGCTAGAGCCGCTGTCTCAGGATTA
GCTTTGGTTTCTAAAGCATGTGGAAGCGATGTTCCAAGGCTAACTTTCTGGTTGTCGAAT
TCCATTATGTTAAGAGCAATCATCAGTCAGGCTGCTGCAGGAGTGCAATTTAATGAAGGG
GCACCAACTGAAACTACTGGCAACAAAGGTAGGTCTGCGTTGGAAAAAATATATATGCAG
CAAAGCATCAAATCAATTGCTAGCCAAGGGAACAAGAGTCATTTAGTTAAGCAATATTAT
AACTGGGAGGACATCGAATCATTCACTCAAGCATTGGAAAAGCTTGAAGGTTGGATCTTC
TCCAAAATCACCAAGTCCCTTTGGTGGCAGACTCTGACTCCACATATGCAGTTTTCGACT
GCAAAAACTAGTAAGACTAAGGGCTCAAGGGTGAAGAAAACATATGGGAGTAGACATTCT
TTGGGCGATCAAGAACAGGGCAAATTTTCCGTAAAACTTTGGAAAAGGGCTCTGAAAGAT
GCCTGTGAAAGGCTTTGTCCACTTCGGGCAGGTGGCCATAAATGTGGCTGCTTACCTGTT
CTGCCAAAGTTGGTGATGAAGCAGTTGGTGAGTAGATTGGATGTGGCAATGTTCAATGCT
ATTCTCCGCGAATCCACTGAAGAAATGCCAACAGATCCAGTGTTTGATCCTATAAGTGAT
CGTAAGGTCCTCCCAATTCCTGCTGGAAAATCAAGCTTTGGAGCTGGTGCACAGTTGAAA
AATGCTGTTGGGAGCTGGTCTGGATGGCTTACAGATCTTATTGGCTTTCAAGATGAAGTT
TCACCAGAGTATAATAACATATTTGGGAATGACAAGAAACCAGAATCGTTCAAGGCTTTT
CGTTTCCTTAATGCATTGAGCAACCTCATGATGCTTCCATTTGAAATGCTCATAGATGCA
TCCACAAGAAAAGAAGTCTGCCCAATACTTGGTCCAGCTTTGATCAAAAGAGTTCTCGCC
AATTTTGTTCCAGATGATTTCCGTCCTGATCCAATTCCAATGAATGTCCTTGAGGCCCTG
GATTCCGAAGATGTAAAAGATGCTCCTGGAGAATTGCTGACTAGCTTCCCGTGCACTTTC
ACATTGCCTGTCTATACACCTCCTCCGGCATTGTCTCTCACTATTTTTATAGAGAAGGTT
GGCAATCAAGCTCCAAAGATTAGGGGGTCATCTGTACTCAAGAAAACGTACACCAGCGAT
GTTGAGCTTGATGAGCTGGACTCACCGTTTACTTCGTTCCTCGCTGATAGCTTCAAGGAT
TATCCAAATTTAGCAAAACCTGCTAGAAATATTGTCAGATACCAGCTTCTCCGTGAAGCG
TGGAAGGAGGTTCAACGGTGA

Peptide Sequence

PEP ID

XP_016459370.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107782934 [Nicotiana tabacum]
Sequence

MGLGKKKKKGASFQIDYIVHIQLIRPWPPSESLRSVQSVLLQWENGDRNSGFVTSSVEDD
YLEINKTFTLFLTLCREKKSKDKFLKNNLEFSLYEYTKENAAQGQLLGTASINFAEYGVI
KETLAISVPLNCKKSSKSLLQPSLYVKVQPAKDKQESDLMIDDAEDDSDAASYTDDDVSS
HSSSTFASSLFEAAWASPSNNVKVAWPSPSRVVKNDMHEEAASGTSKSEENTQISKEKYI
DRLISKITTSHMHTQAGVDSQNSSDETTEHDFGQDELFLDDTRDLSDNKIAKSMKRQGTM
SSIRKALGAQITHGRLKPVKSVQIRDSASANVFLGNTEIIKKEIKEHTPIETSSIAKSTG
VEKKEPKNTTSTSATEKRDPANVMSKSKPESESRIQMLEEELKEAAAIEVGFYSVVAEHG
SSMNKVHTPARRLARFYLHAWRTKSTAKQASAARAAVSGLALVSKACGSDVPRLTFWLSN
SIMLRAIISQAAAGVQFNEGAPTETTGNKGRSALEKIYMQQSIKSIASQGNKSHLVKQYY
NWEDIESFTQALEKLEGWIFSKITKSLWWQTLTPHMQFSTAKTSKTKGSRVKKTYGSRHS
LGDQEQGKFSVKLWKRALKDACERLCPLRAGGHKCGCLPVLPKLVMKQLVSRLDVAMFNA
ILRESTEEMPTDPVFDPISDRKVLPIPAGKSSFGAGAQLKNAVGSWSGWLTDLIGFQDEV
SPEYNNIFGNDKKPESFKAFRFLNALSNLMMLPFEMLIDASTRKEVCPILGPALIKRVLA
NFVPDDFRPDPIPMNVLEALDSEDVKDAPGELLTSFPCTFTLPVYTPPPALSLTIFIEKV
GNQAPKIRGSSVLKKTYTSDVELDELDSPFTSFLADSFKDYPNLAKPARNIVRYQLLREA
WKEVQR

Transcript Sequence

Gene sequence data has not been registered.